SLiMPred @ Bioware
Predicts linear motifs in a protein sequence based on our neural network which was trained on Short Linear Motif containing proteins. Information about the Relative Local Conservation and the disorder context of the peptide are included in the results.
Pages
- Manual
- Paper JMB
- REST API
- Distill
- Help and General Queries, as well as requests from training datasets should be sent to the Bioware Users Group
- Legacy version available here
- If you use this service please cite:
Mooney C, Pollastri G, Shields DC, Haslam NJ. 2012 Prediction of short linear protein binding regions. J Mol Biol. 2012 Jan 6;415(1):193-204
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Analyses currently require a UniProt ID in order to calculate conservation statistics.
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