This server is no longer supported. Please use the newest version at

SLiMSearch3 @ Bioware

SLiMSearch searches for occurrences of pre-defined motifs in protein sequences. SLiMSearch uses sequence context in terms of structural disorder and evolutionary conservation to mask input proteins and/or rank motif occurrences. Read more ...

Show input       Show results

Input options

Please enter a motif here.
(Load example|Clear example)

Your job is running...

Send me an email when the job is finished :



Filter by UniprotID:

(OPTIONAL) Enter the TaxonID here :

Enter the OrthDB here :


JobId : No result yet



Welcome to SLiMSearch 3. SLiMSearch 2 server will no longer be updated and has been restricted to core functionality, it will remain active as a legacy server here. SLiMSearch3 old version here.

Major changes.
  • New search database. Orthologue alignments are now made using the Quest for Orthologues standard dataset
Minor changes.
  • Added new probabilistic conservation metrics
  • Added new motif conservation range information
  • Added new species range information