This server is no longer supported. Please use the newest version at http://slim.uslim.ucd.ie/slimsearch/

SLiMSearch3 @ Bioware

SLiMSearch searches for occurrences of pre-defined motifs in protein sequences. SLiMSearch uses sequence context in terms of structural disorder and evolutionary conservation to mask input proteins and/or rank motif occurrences. Read more ...

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Please enter a motif here.
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News:

Welcome to SLiMSearch 3. SLiMSearch 2 server will no longer be updated and has been restricted to core functionality, it will remain active as a legacy server here. SLiMSearch3 old version here.

Major changes.
  • New search database. Orthologue alignments are now made using the Quest for Orthologues standard dataset
Minor changes.
  • Added new probabilistic conservation metrics
  • Added new motif conservation range information
  • Added new species range information