PeptideLocator is for users interested in identifying bioactive peptides within a protein sequence.
PeptideLocator was trained on a set of non-redundant protein sequences conatining known bioactive peptides.
This tool takes a UniProt
sequence ID. The method uses the entire protein sequence as input, since it is trained on full length protein sequences.
The maximum length of a protein sequence to be analysed is 10,000 residues.
The tool outputs a plot of the PeptideLocator score for each residue in the input protein sequence.
This score represents the tool's prediction of the likelihood that each residue is part of a bioactive peptide within that protein sequence.
Information about the Relative Local Conservation and the disorder context of the protein are included in the results.
- If you use this service please cite: PeptideLocator: prediction of bioactive peptides in protein sequences Paper
- Rest Service: API
- Availability: If you would like to run PeptideLocator locally please contact the Bioware Users Group
- Help and General Queries, as well as requests from training datasets should be sent to the Bioware Users Group