SLiMSearch searches for occurrences of pre-defined motifs in protein sequences.
SLiMSearch uses sequence context in terms of structural disorder and evolutionary conservation to mask input proteins and/or rank motif occurrences.
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The SLiMSearch publication is currently in preparation.
Davey, Norman E., Haslam, Niall J., Shields, Denis C. and Edwards, Richard J.
SLiMSearch: a webserver for finding novel occurrences of short linear motifs in proteins, incorporating sequence context. Pattern Recognition in Bioinformatics.
Pattern Recognition in Bioinformatics 2010
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Step 1: Choose a search database